<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/1999/REC-html401-19991224/loose.dtd"> <html><head><title>Details for gene set VERHAAK_PN_2010[GSEA]</title><link href='xtools.css' rel='stylesheet'><link href='http://www.gsea-msigdb.org/gsea/images/icon_16x16.png' rel='shortcut icon'></head><body><div class='keyValTable'><table cols='2' border='0'><th class='keyValTable'></th><th class='keyValTable'></th><tr><td>Dataset</td><td>NF1_GRD_exprs.NF1_GRD_phenotype.cls<br>#GRD_versus_Ctrl.NF1_GRD_phenotype.cls<br>#GRD_versus_Ctrl_repos</td></tr><tr><td>Phenotype</td><td>NF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos</td></tr><tr><td>Upregulated in class</td><td>GRD</td></tr><tr><td>GeneSet</td><td>VERHAAK_PN_2010</td></tr><tr><td>Enrichment Score (ES)</td><td>0.42768008</td></tr><tr><td>Normalized Enrichment Score (NES)</td><td>1.9229542</td></tr><tr><td>Nominal p-value</td><td>0.0</td></tr><tr><td>FDR q-value</td><td>0.0011165414</td></tr><tr><td>FWER p-Value</td><td>0.002</td></tr><caption class='table'>Table: GSEA Results Summary</caption></table></div><br><div class='image'><img name='enplot_VERHAAK_PN_2010' src='enplot_VERHAAK_PN_2010_104.png'><br><br><caption>Fig 1: Enrichment plot: VERHAAK_PN_2010    <br> Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List</caption></div><br><div class='richTable'><table cols='7' border='1'><th class='richTable'></th><th class='richTable'>SYMBOL</th><th class='richTable'>TITLE</th><th class='richTable'>RANK IN GENE LIST</th><th class='richTable'>RANK METRIC SCORE</th><th class='richTable'>RUNNING ES</th><th class='richTable'>CORE ENRICHMENT</th><tr><td class='lessen'>1</td><td><a href='https://ensembl.org/Search/Results?q=GRIA2'>GRIA2</a></td><td>GRIA2</td><td>27</td><td>0.178</td><td>0.0333</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>2</td><td><a href='https://ensembl.org/Search/Results?q=CLASP2'>CLASP2</a></td><td>CLASP2</td><td>34</td><td>0.171</td><td>0.0661</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>3</td><td><a href='https://ensembl.org/Search/Results?q=MAP2'>MAP2</a></td><td>MAP2</td><td>145</td><td>0.108</td><td>0.0820</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>4</td><td><a href='https://ensembl.org/Search/Results?q=SEZ6L'>SEZ6L</a></td><td>SEZ6L</td><td>228</td><td>0.096</td><td>0.0968</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>5</td><td><a href='https://ensembl.org/Search/Results?q=TMCC1'>TMCC1</a></td><td>TMCC1</td><td>264</td><td>0.093</td><td>0.1131</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>6</td><td><a href='https://ensembl.org/Search/Results?q=SRGAP3'>SRGAP3</a></td><td>SRGAP3</td><td>327</td><td>0.088</td><td>0.1272</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>7</td><td><a href='https://ensembl.org/Search/Results?q=MTSS1'>MTSS1</a></td><td>MTSS1</td><td>362</td><td>0.085</td><td>0.1421</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>8</td><td><a href='https://ensembl.org/Search/Results?q=SNX26'>SNX26</a></td><td>SNX26</td><td>373</td><td>0.084</td><td>0.1579</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>9</td><td><a href='https://ensembl.org/Search/Results?q=NCALD'>NCALD</a></td><td>NCALD</td><td>403</td><td>0.082</td><td>0.1724</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>10</td><td><a href='https://ensembl.org/Search/Results?q=NCAM1'>NCAM1</a></td><td>NCAM1</td><td>549</td><td>0.075</td><td>0.1803</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>11</td><td><a href='https://ensembl.org/Search/Results?q=ZNF286A'>ZNF286A</a></td><td>ZNF286A</td><td>668</td><td>0.071</td><td>0.1884</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>12</td><td><a href='https://ensembl.org/Search/Results?q=ABAT'>ABAT</a></td><td>ABAT</td><td>806</td><td>0.066</td><td>0.1947</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>13</td><td><a href='https://ensembl.org/Search/Results?q=FXYD6'>FXYD6</a></td><td>FXYD6</td><td>892</td><td>0.063</td><td>0.2030</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>14</td><td><a href='https://ensembl.org/Search/Results?q=PPM1D'>PPM1D</a></td><td>PPM1D</td><td>995</td><td>0.061</td><td>0.2100</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>15</td><td><a href='https://ensembl.org/Search/Results?q=CBX1'>CBX1</a></td><td>CBX1</td><td>1000</td><td>0.060</td><td>0.2215</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>16</td><td><a href='https://ensembl.org/Search/Results?q=RALGPS1'>RALGPS1</a></td><td>RALGPS1</td><td>1050</td><td>0.060</td><td>0.2307</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>17</td><td><a href='https://ensembl.org/Search/Results?q=CDKN1B'>CDKN1B</a></td><td>CDKN1B</td><td>1088</td><td>0.059</td><td>0.2404</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>18</td><td><a href='https://ensembl.org/Search/Results?q=PLCB4'>PLCB4</a></td><td>PLCB4</td><td>1109</td><td>0.058</td><td>0.2508</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>19</td><td><a href='https://ensembl.org/Search/Results?q=MYB'>MYB</a></td><td>MYB</td><td>1166</td><td>0.057</td><td>0.2593</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>20</td><td><a href='https://ensembl.org/Search/Results?q=FAM125B'>FAM125B</a></td><td>FAM125B</td><td>1173</td><td>0.057</td><td>0.2701</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>21</td><td><a href='https://ensembl.org/Search/Results?q=ZNF184'>ZNF184</a></td><td>ZNF184</td><td>1217</td><td>0.056</td><td>0.2789</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>22</td><td><a href='https://ensembl.org/Search/Results?q=STMN1'>STMN1</a></td><td>STMN1</td><td>1330</td><td>0.054</td><td>0.2841</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>23</td><td><a href='https://ensembl.org/Search/Results?q=SATB1'>SATB1</a></td><td>SATB1</td><td>1348</td><td>0.054</td><td>0.2937</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>24</td><td><a href='https://ensembl.org/Search/Results?q=DPYSL4'>DPYSL4</a></td><td>DPYSL4</td><td>1368</td><td>0.053</td><td>0.3031</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>25</td><td><a href='https://ensembl.org/Search/Results?q=NLGN3'>NLGN3</a></td><td>NLGN3</td><td>1376</td><td>0.053</td><td>0.3130</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>26</td><td><a href='https://ensembl.org/Search/Results?q=TOP2B'>TOP2B</a></td><td>TOP2B</td><td>1403</td><td>0.053</td><td>0.3220</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>27</td><td><a href='https://ensembl.org/Search/Results?q=MARCKSL1'>MARCKSL1</a></td><td>MARCKSL1</td><td>1500</td><td>0.051</td><td>0.3274</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>28</td><td><a href='https://ensembl.org/Search/Results?q=STMN4'>STMN4</a></td><td>STMN4</td><td>1560</td><td>0.050</td><td>0.3344</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>29</td><td><a href='https://ensembl.org/Search/Results?q=TTYH1'>TTYH1</a></td><td>TTYH1</td><td>1643</td><td>0.049</td><td>0.3401</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>30</td><td><a href='https://ensembl.org/Search/Results?q=MATR3'>MATR3</a></td><td>MATR3</td><td>1662</td><td>0.049</td><td>0.3488</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>31</td><td><a href='https://ensembl.org/Search/Results?q=ATP1A3'>ATP1A3</a></td><td>ATP1A3</td><td>1678</td><td>0.049</td><td>0.3575</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>32</td><td><a href='https://ensembl.org/Search/Results?q=DBN1'>DBN1</a></td><td>DBN1</td><td>1852</td><td>0.046</td><td>0.3584</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>33</td><td><a href='https://ensembl.org/Search/Results?q=ARHGEF9'>ARHGEF9</a></td><td>ARHGEF9</td><td>1905</td><td>0.046</td><td>0.3649</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>34</td><td><a href='https://ensembl.org/Search/Results?q=HN1'>HN1</a></td><td>HN1</td><td>1966</td><td>0.045</td><td>0.3708</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>35</td><td><a href='https://ensembl.org/Search/Results?q=MARCKS'>MARCKS</a></td><td>MARCKS</td><td>2032</td><td>0.044</td><td>0.3763</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>36</td><td><a href='https://ensembl.org/Search/Results?q=TAF5'>TAF5</a></td><td>TAF5</td><td>2071</td><td>0.044</td><td>0.3831</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>37</td><td><a href='https://ensembl.org/Search/Results?q=SOX10'>SOX10</a></td><td>SOX10</td><td>2218</td><td>0.042</td><td>0.3844</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>38</td><td><a href='https://ensembl.org/Search/Results?q=RAB33A'>RAB33A</a></td><td>RAB33A</td><td>2265</td><td>0.042</td><td>0.3903</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>39</td><td><a href='https://ensembl.org/Search/Results?q=NRXN2'>NRXN2</a></td><td>NRXN2</td><td>2272</td><td>0.042</td><td>0.3981</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>40</td><td><a href='https://ensembl.org/Search/Results?q=BCOR'>BCOR</a></td><td>BCOR</td><td>2426</td><td>0.040</td><td>0.3987</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>41</td><td><a href='https://ensembl.org/Search/Results?q=SEC61A2'>SEC61A2</a></td><td>SEC61A2</td><td>2469</td><td>0.040</td><td>0.4044</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>42</td><td><a href='https://ensembl.org/Search/Results?q=SCG3'>SCG3</a></td><td>SCG3</td><td>2487</td><td>0.039</td><td>0.4112</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>43</td><td><a href='https://ensembl.org/Search/Results?q=MAST1'>MAST1</a></td><td>MAST1</td><td>2578</td><td>0.039</td><td>0.4145</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>44</td><td><a href='https://ensembl.org/Search/Results?q=KLRK1'>KLRK1</a></td><td>KLRK1</td><td>2943</td><td>0.036</td><td>0.4044</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>45</td><td><a href='https://ensembl.org/Search/Results?q=MYT1'>MYT1</a></td><td>MYT1</td><td>3053</td><td>0.035</td><td>0.4061</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>46</td><td><a href='https://ensembl.org/Search/Results?q=C6orf134'>C6orf134</a></td><td>C6orf134</td><td>3169</td><td>0.034</td><td>0.4073</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>47</td><td><a href='https://ensembl.org/Search/Results?q=C1QL1'>C1QL1</a></td><td>C1QL1</td><td>3268</td><td>0.033</td><td>0.4092</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>48</td><td><a href='https://ensembl.org/Search/Results?q=FLRT1'>FLRT1</a></td><td>FLRT1</td><td>3282</td><td>0.033</td><td>0.4150</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>49</td><td><a href='https://ensembl.org/Search/Results?q=LPHN3'>LPHN3</a></td><td>LPHN3</td><td>3346</td><td>0.033</td><td>0.4183</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>50</td><td><a href='https://ensembl.org/Search/Results?q=TMEFF1'>TMEFF1</a></td><td>TMEFF1</td><td>3356</td><td>0.033</td><td>0.4242</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>51</td><td><a href='https://ensembl.org/Search/Results?q=DUSP26'>DUSP26</a></td><td>DUSP26</td><td>3426</td><td>0.032</td><td>0.4272</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>52</td><td><a href='https://ensembl.org/Search/Results?q=ALCAM'>ALCAM</a></td><td>ALCAM</td><td>3548</td><td>0.031</td><td>0.4276</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>53</td><td><a href='https://ensembl.org/Search/Results?q=WASF1'>WASF1</a></td><td>WASF1</td><td>3673</td><td>0.030</td><td>0.4277</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>54</td><td><a href='https://ensembl.org/Search/Results?q=CDK5R1'>CDK5R1</a></td><td>CDK5R1</td><td>4054</td><td>0.028</td><td>0.4153</td><td>No</td></tr><tr><td class='lessen'>55</td><td><a href='https://ensembl.org/Search/Results?q=CSPG5'>CSPG5</a></td><td>CSPG5</td><td>4138</td><td>0.027</td><td>0.4168</td><td>No</td></tr><tr><td class='lessen'>56</td><td><a href='https://ensembl.org/Search/Results?q=TOPBP1'>TOPBP1</a></td><td>TOPBP1</td><td>4266</td><td>0.027</td><td>0.4160</td><td>No</td></tr><tr><td class='lessen'>57</td><td><a href='https://ensembl.org/Search/Results?q=BCL7A'>BCL7A</a></td><td>BCL7A</td><td>4293</td><td>0.026</td><td>0.4199</td><td>No</td></tr><tr><td class='lessen'>58</td><td><a href='https://ensembl.org/Search/Results?q=SLCO5A1'>SLCO5A1</a></td><td>SLCO5A1</td><td>4568</td><td>0.025</td><td>0.4119</td><td>No</td></tr><tr><td class='lessen'>59</td><td><a href='https://ensembl.org/Search/Results?q=PFN2'>PFN2</a></td><td>PFN2</td><td>4694</td><td>0.024</td><td>0.4108</td><td>No</td></tr><tr><td class='lessen'>60</td><td><a href='https://ensembl.org/Search/Results?q=CRMP1'>CRMP1</a></td><td>CRMP1</td><td>4989</td><td>0.023</td><td>0.4014</td><td>No</td></tr><tr><td class='lessen'>61</td><td><a href='https://ensembl.org/Search/Results?q=C1orf106'>C1orf106</a></td><td>C1orf106</td><td>5333</td><td>0.021</td><td>0.3894</td><td>No</td></tr><tr><td class='lessen'>62</td><td><a href='https://ensembl.org/Search/Results?q=BCAN'>BCAN</a></td><td>BCAN</td><td>5383</td><td>0.021</td><td>0.3911</td><td>No</td></tr><tr><td class='lessen'>63</td><td><a href='https://ensembl.org/Search/Results?q=VEZF1'>VEZF1</a></td><td>VEZF1</td><td>5451</td><td>0.020</td><td>0.3919</td><td>No</td></tr><tr><td class='lessen'>64</td><td><a href='https://ensembl.org/Search/Results?q=ACTR1A'>ACTR1A</a></td><td>ACTR1A</td><td>5470</td><td>0.020</td><td>0.3950</td><td>No</td></tr><tr><td class='lessen'>65</td><td><a href='https://ensembl.org/Search/Results?q=PCDH11Y'>PCDH11Y</a></td><td>PCDH11Y</td><td>5599</td><td>0.020</td><td>0.3928</td><td>No</td></tr><tr><td class='lessen'>66</td><td><a href='https://ensembl.org/Search/Results?q=PDE10A'>PDE10A</a></td><td>PDE10A</td><td>5744</td><td>0.019</td><td>0.3898</td><td>No</td></tr><tr><td class='lessen'>67</td><td><a href='https://ensembl.org/Search/Results?q=SOX11'>SOX11</a></td><td>SOX11</td><td>5768</td><td>0.019</td><td>0.3923</td><td>No</td></tr><tr><td class='lessen'>68</td><td><a href='https://ensembl.org/Search/Results?q=MMP15'>MMP15</a></td><td>MMP15</td><td>5862</td><td>0.018</td><td>0.3915</td><td>No</td></tr><tr><td class='lessen'>69</td><td><a href='https://ensembl.org/Search/Results?q=RAP2A'>RAP2A</a></td><td>RAP2A</td><td>5913</td><td>0.018</td><td>0.3927</td><td>No</td></tr><tr><td class='lessen'>70</td><td><a href='https://ensembl.org/Search/Results?q=CHD7'>CHD7</a></td><td>CHD7</td><td>6015</td><td>0.018</td><td>0.3914</td><td>No</td></tr><tr><td class='lessen'>71</td><td><a href='https://ensembl.org/Search/Results?q=CRB1'>CRB1</a></td><td>CRB1</td><td>6017</td><td>0.018</td><td>0.3948</td><td>No</td></tr><tr><td class='lessen'>72</td><td><a href='https://ensembl.org/Search/Results?q=ZEB2'>ZEB2</a></td><td>ZEB2</td><td>6101</td><td>0.017</td><td>0.3943</td><td>No</td></tr><tr><td class='lessen'>73</td><td><a href='https://ensembl.org/Search/Results?q=MMP16'>MMP16</a></td><td>MMP16</td><td>6212</td><td>0.017</td><td>0.3924</td><td>No</td></tr><tr><td class='lessen'>74</td><td><a href='https://ensembl.org/Search/Results?q=DPF1'>DPF1</a></td><td>DPF1</td><td>6416</td><td>0.016</td><td>0.3860</td><td>No</td></tr><tr><td class='lessen'>75</td><td><a href='https://ensembl.org/Search/Results?q=CSNK1E'>CSNK1E</a></td><td>CSNK1E</td><td>6457</td><td>0.016</td><td>0.3872</td><td>No</td></tr><tr><td class='lessen'>76</td><td><a href='https://ensembl.org/Search/Results?q=PAFAH1B3'>PAFAH1B3</a></td><td>PAFAH1B3</td><td>6681</td><td>0.015</td><td>0.3796</td><td>No</td></tr><tr><td class='lessen'>77</td><td><a href='https://ensembl.org/Search/Results?q=TSPAN3'>TSPAN3</a></td><td>TSPAN3</td><td>6907</td><td>0.014</td><td>0.3718</td><td>No</td></tr><tr><td class='lessen'>78</td><td><a href='https://ensembl.org/Search/Results?q=SOX2'>SOX2</a></td><td>SOX2</td><td>6993</td><td>0.013</td><td>0.3704</td><td>No</td></tr><tr><td class='lessen'>79</td><td><a href='https://ensembl.org/Search/Results?q=CASK'>CASK</a></td><td>CASK</td><td>7134</td><td>0.013</td><td>0.3664</td><td>No</td></tr><tr><td class='lessen'>80</td><td><a href='https://ensembl.org/Search/Results?q=YPEL1'>YPEL1</a></td><td>YPEL1</td><td>7294</td><td>0.012</td><td>0.3614</td><td>No</td></tr><tr><td class='lessen'>81</td><td><a href='https://ensembl.org/Search/Results?q=GPR17'>GPR17</a></td><td>GPR17</td><td>7361</td><td>0.012</td><td>0.3606</td><td>No</td></tr><tr><td class='lessen'>82</td><td><a href='https://ensembl.org/Search/Results?q=ZNF711'>ZNF711</a></td><td>ZNF711</td><td>7592</td><td>0.011</td><td>0.3520</td><td>No</td></tr><tr><td class='lessen'>83</td><td><a href='https://ensembl.org/Search/Results?q=PELI1'>PELI1</a></td><td>PELI1</td><td>7614</td><td>0.011</td><td>0.3532</td><td>No</td></tr><tr><td class='lessen'>84</td><td><a href='https://ensembl.org/Search/Results?q=GPM6A'>GPM6A</a></td><td>GPM6A</td><td>7717</td><td>0.011</td><td>0.3505</td><td>No</td></tr><tr><td class='lessen'>85</td><td><a href='https://ensembl.org/Search/Results?q=EPB41'>EPB41</a></td><td>EPB41</td><td>7892</td><td>0.010</td><td>0.3444</td><td>No</td></tr><tr><td class='lessen'>86</td><td><a href='https://ensembl.org/Search/Results?q=AMOTL2'>AMOTL2</a></td><td>AMOTL2</td><td>7900</td><td>0.010</td><td>0.3460</td><td>No</td></tr><tr><td class='lessen'>87</td><td><a href='https://ensembl.org/Search/Results?q=AOF2'>AOF2</a></td><td>AOF2</td><td>8005</td><td>0.010</td><td>0.3430</td><td>No</td></tr><tr><td class='lessen'>88</td><td><a href='https://ensembl.org/Search/Results?q=MLLT11'>MLLT11</a></td><td>MLLT11</td><td>8092</td><td>0.009</td><td>0.3408</td><td>No</td></tr><tr><td class='lessen'>89</td><td><a href='https://ensembl.org/Search/Results?q=TTC3'>TTC3</a></td><td>TTC3</td><td>8101</td><td>0.009</td><td>0.3422</td><td>No</td></tr><tr><td class='lessen'>90</td><td><a href='https://ensembl.org/Search/Results?q=KLRC4'>KLRC4</a></td><td>KLRC4</td><td>8265</td><td>0.009</td><td>0.3362</td><td>No</td></tr><tr><td class='lessen'>91</td><td><a href='https://ensembl.org/Search/Results?q=GNG4'>GNG4</a></td><td>GNG4</td><td>8384</td><td>0.008</td><td>0.3323</td><td>No</td></tr><tr><td class='lessen'>92</td><td><a href='https://ensembl.org/Search/Results?q=CDC7'>CDC7</a></td><td>CDC7</td><td>8577</td><td>0.008</td><td>0.3248</td><td>No</td></tr><tr><td class='lessen'>93</td><td><a href='https://ensembl.org/Search/Results?q=P2RX7'>P2RX7</a></td><td>P2RX7</td><td>8606</td><td>0.007</td><td>0.3249</td><td>No</td></tr><tr><td class='lessen'>94</td><td><a href='https://ensembl.org/Search/Results?q=VAX2'>VAX2</a></td><td>VAX2</td><td>8641</td><td>0.007</td><td>0.3248</td><td>No</td></tr><tr><td class='lessen'>95</td><td><a href='https://ensembl.org/Search/Results?q=SCN3A'>SCN3A</a></td><td>SCN3A</td><td>8713</td><td>0.007</td><td>0.3228</td><td>No</td></tr><tr><td class='lessen'>96</td><td><a href='https://ensembl.org/Search/Results?q=MYST2'>MYST2</a></td><td>MYST2</td><td>9183</td><td>0.005</td><td>0.3020</td><td>No</td></tr><tr><td class='lessen'>97</td><td><a href='https://ensembl.org/Search/Results?q=PODXL2'>PODXL2</a></td><td>PODXL2</td><td>9226</td><td>0.005</td><td>0.3010</td><td>No</td></tr><tr><td class='lessen'>98</td><td><a href='https://ensembl.org/Search/Results?q=LRP6'>LRP6</a></td><td>LRP6</td><td>9312</td><td>0.005</td><td>0.2980</td><td>No</td></tr><tr><td class='lessen'>99</td><td><a href='https://ensembl.org/Search/Results?q=GRID2'>GRID2</a></td><td>GRID2</td><td>9539</td><td>0.004</td><td>0.2882</td><td>No</td></tr><tr><td class='lessen'>100</td><td><a href='https://ensembl.org/Search/Results?q=GADD45G'>GADD45G</a></td><td>GADD45G</td><td>9799</td><td>0.003</td><td>0.2767</td><td>No</td></tr><tr><td class='lessen'>101</td><td><a href='https://ensembl.org/Search/Results?q=NOL4'>NOL4</a></td><td>NOL4</td><td>9805</td><td>0.003</td><td>0.2770</td><td>No</td></tr><tr><td class='lessen'>102</td><td><a href='https://ensembl.org/Search/Results?q=ASCL1'>ASCL1</a></td><td>ASCL1</td><td>10271</td><td>0.001</td><td>0.2556</td><td>No</td></tr><tr><td class='lessen'>103</td><td><a href='https://ensembl.org/Search/Results?q=EPHB1'>EPHB1</a></td><td>EPHB1</td><td>10273</td><td>0.001</td><td>0.2558</td><td>No</td></tr><tr><td class='lessen'>104</td><td><a href='https://ensembl.org/Search/Results?q=ZNF643'>ZNF643</a></td><td>ZNF643</td><td>10518</td><td>0.001</td><td>0.2445</td><td>No</td></tr><tr><td class='lessen'>105</td><td><a href='https://ensembl.org/Search/Results?q=HRASLS'>HRASLS</a></td><td>HRASLS</td><td>10626</td><td>0.000</td><td>0.2395</td><td>No</td></tr><tr><td class='lessen'>106</td><td><a href='https://ensembl.org/Search/Results?q=BAI3'>BAI3</a></td><td>BAI3</td><td>10928</td><td>-0.001</td><td>0.2256</td><td>No</td></tr><tr><td class='lessen'>107</td><td><a href='https://ensembl.org/Search/Results?q=MAPT'>MAPT</a></td><td>MAPT</td><td>11069</td><td>-0.001</td><td>0.2194</td><td>No</td></tr><tr><td class='lessen'>108</td><td><a href='https://ensembl.org/Search/Results?q=ATAD5'>ATAD5</a></td><td>ATAD5</td><td>11274</td><td>-0.002</td><td>0.2102</td><td>No</td></tr><tr><td class='lessen'>109</td><td><a href='https://ensembl.org/Search/Results?q=HOXD3'>HOXD3</a></td><td>HOXD3</td><td>11340</td><td>-0.002</td><td>0.2077</td><td>No</td></tr><tr><td class='lessen'>110</td><td><a href='https://ensembl.org/Search/Results?q=FGF9'>FGF9</a></td><td>FGF9</td><td>11403</td><td>-0.003</td><td>0.2053</td><td>No</td></tr><tr><td class='lessen'>111</td><td><a href='https://ensembl.org/Search/Results?q=ERBB3'>ERBB3</a></td><td>ERBB3</td><td>11564</td><td>-0.003</td><td>0.1984</td><td>No</td></tr><tr><td class='lessen'>112</td><td><a href='https://ensembl.org/Search/Results?q=RUFY3'>RUFY3</a></td><td>RUFY3</td><td>11730</td><td>-0.004</td><td>0.1915</td><td>No</td></tr><tr><td class='lessen'>113</td><td><a href='https://ensembl.org/Search/Results?q=IL1RAPL1'>IL1RAPL1</a></td><td>IL1RAPL1</td><td>11783</td><td>-0.004</td><td>0.1898</td><td>No</td></tr><tr><td class='lessen'>114</td><td><a href='https://ensembl.org/Search/Results?q=SORCS3'>SORCS3</a></td><td>SORCS3</td><td>12038</td><td>-0.005</td><td>0.1788</td><td>No</td></tr><tr><td class='lessen'>115</td><td><a href='https://ensembl.org/Search/Results?q=DPP6'>DPP6</a></td><td>DPP6</td><td>12045</td><td>-0.005</td><td>0.1795</td><td>No</td></tr><tr><td class='lessen'>116</td><td><a href='https://ensembl.org/Search/Results?q=TMEM35'>TMEM35</a></td><td>TMEM35</td><td>12134</td><td>-0.005</td><td>0.1764</td><td>No</td></tr><tr><td class='lessen'>117</td><td><a href='https://ensembl.org/Search/Results?q=BEX1'>BEX1</a></td><td>BEX1</td><td>12138</td><td>-0.005</td><td>0.1772</td><td>No</td></tr><tr><td class='lessen'>118</td><td><a href='https://ensembl.org/Search/Results?q=C1orf61'>C1orf61</a></td><td>C1orf61</td><td>12173</td><td>-0.005</td><td>0.1767</td><td>No</td></tr><tr><td class='lessen'>119</td><td><a href='https://ensembl.org/Search/Results?q=DCX'>DCX</a></td><td>DCX</td><td>12388</td><td>-0.006</td><td>0.1678</td><td>No</td></tr><tr><td class='lessen'>120</td><td><a href='https://ensembl.org/Search/Results?q=CXXC4'>CXXC4</a></td><td>CXXC4</td><td>12495</td><td>-0.006</td><td>0.1641</td><td>No</td></tr><tr><td class='lessen'>121</td><td><a href='https://ensembl.org/Search/Results?q=PHF16'>PHF16</a></td><td>PHF16</td><td>12818</td><td>-0.008</td><td>0.1506</td><td>No</td></tr><tr><td class='lessen'>122</td><td><a href='https://ensembl.org/Search/Results?q=GABRA3'>GABRA3</a></td><td>GABRA3</td><td>12970</td><td>-0.008</td><td>0.1451</td><td>No</td></tr><tr><td class='lessen'>123</td><td><a href='https://ensembl.org/Search/Results?q=RALGPS2'>RALGPS2</a></td><td>RALGPS2</td><td>13046</td><td>-0.008</td><td>0.1432</td><td>No</td></tr><tr><td class='lessen'>124</td><td><a href='https://ensembl.org/Search/Results?q=PURG'>PURG</a></td><td>PURG</td><td>13098</td><td>-0.009</td><td>0.1425</td><td>No</td></tr><tr><td class='lessen'>125</td><td><a href='https://ensembl.org/Search/Results?q=KLRC3'>KLRC3</a></td><td>KLRC3</td><td>13100</td><td>-0.009</td><td>0.1441</td><td>No</td></tr><tr><td class='lessen'>126</td><td><a href='https://ensembl.org/Search/Results?q=CLGN'>CLGN</a></td><td>CLGN</td><td>13156</td><td>-0.009</td><td>0.1433</td><td>No</td></tr><tr><td class='lessen'>127</td><td><a href='https://ensembl.org/Search/Results?q=PCDH11X'>PCDH11X</a></td><td>PCDH11X</td><td>13392</td><td>-0.010</td><td>0.1342</td><td>No</td></tr><tr><td class='lessen'>128</td><td><a href='https://ensembl.org/Search/Results?q=SOX4'>SOX4</a></td><td>SOX4</td><td>13444</td><td>-0.010</td><td>0.1337</td><td>No</td></tr><tr><td class='lessen'>129</td><td><a href='https://ensembl.org/Search/Results?q=TOX3'>TOX3</a></td><td>TOX3</td><td>13571</td><td>-0.010</td><td>0.1298</td><td>No</td></tr><tr><td class='lessen'>130</td><td><a href='https://ensembl.org/Search/Results?q=CA10'>CA10</a></td><td>CA10</td><td>13883</td><td>-0.012</td><td>0.1176</td><td>No</td></tr><tr><td class='lessen'>131</td><td><a href='https://ensembl.org/Search/Results?q=ZNF510'>ZNF510</a></td><td>ZNF510</td><td>14252</td><td>-0.013</td><td>0.1029</td><td>No</td></tr><tr><td class='lessen'>132</td><td><a href='https://ensembl.org/Search/Results?q=ZNF248'>ZNF248</a></td><td>ZNF248</td><td>14416</td><td>-0.014</td><td>0.0979</td><td>No</td></tr><tr><td class='lessen'>133</td><td><a href='https://ensembl.org/Search/Results?q=HMGB3'>HMGB3</a></td><td>HMGB3</td><td>14419</td><td>-0.014</td><td>0.1005</td><td>No</td></tr><tr><td class='lessen'>134</td><td><a href='https://ensembl.org/Search/Results?q=RBPJ'>RBPJ</a></td><td>RBPJ</td><td>14462</td><td>-0.014</td><td>0.1012</td><td>No</td></tr><tr><td class='lessen'>135</td><td><a href='https://ensembl.org/Search/Results?q=RAD21'>RAD21</a></td><td>RAD21</td><td>14563</td><td>-0.014</td><td>0.0993</td><td>No</td></tr><tr><td class='lessen'>136</td><td><a href='https://ensembl.org/Search/Results?q=DLL3'>DLL3</a></td><td>DLL3</td><td>14605</td><td>-0.014</td><td>0.1002</td><td>No</td></tr><tr><td class='lessen'>137</td><td><a href='https://ensembl.org/Search/Results?q=TMEM118'>TMEM118</a></td><td>TMEM118</td><td>14809</td><td>-0.015</td><td>0.0936</td><td>No</td></tr><tr><td class='lessen'>138</td><td><a href='https://ensembl.org/Search/Results?q=CKB'>CKB</a></td><td>CKB</td><td>15032</td><td>-0.016</td><td>0.0864</td><td>No</td></tr><tr><td class='lessen'>139</td><td><a href='https://ensembl.org/Search/Results?q=HDAC2'>HDAC2</a></td><td>HDAC2</td><td>15049</td><td>-0.016</td><td>0.0888</td><td>No</td></tr><tr><td class='lessen'>140</td><td><a href='https://ensembl.org/Search/Results?q=NR0B1'>NR0B1</a></td><td>NR0B1</td><td>15070</td><td>-0.016</td><td>0.0911</td><td>No</td></tr><tr><td class='lessen'>141</td><td><a href='https://ensembl.org/Search/Results?q=KIF21B'>KIF21B</a></td><td>KIF21B</td><td>15568</td><td>-0.018</td><td>0.0714</td><td>No</td></tr><tr><td class='lessen'>142</td><td><a href='https://ensembl.org/Search/Results?q=NRXN1'>NRXN1</a></td><td>NRXN1</td><td>16554</td><td>-0.023</td><td>0.0299</td><td>No</td></tr><tr><td class='lessen'>143</td><td><a href='https://ensembl.org/Search/Results?q=PPM1E'>PPM1E</a></td><td>PPM1E</td><td>16778</td><td>-0.024</td><td>0.0242</td><td>No</td></tr><tr><td class='lessen'>144</td><td><a href='https://ensembl.org/Search/Results?q=FHOD3'>FHOD3</a></td><td>FHOD3</td><td>17073</td><td>-0.026</td><td>0.0155</td><td>No</td></tr><tr><td class='lessen'>145</td><td><a href='https://ensembl.org/Search/Results?q=GSTA4'>GSTA4</a></td><td>GSTA4</td><td>17184</td><td>-0.026</td><td>0.0154</td><td>No</td></tr><tr><td class='lessen'>146</td><td><a href='https://ensembl.org/Search/Results?q=REEP1'>REEP1</a></td><td>REEP1</td><td>17553</td><td>-0.028</td><td>0.0037</td><td>No</td></tr><tr><td class='lessen'>147</td><td><a href='https://ensembl.org/Search/Results?q=CAMSAP1L1'>CAMSAP1L1</a></td><td>CAMSAP1L1</td><td>17874</td><td>-0.030</td><td>-0.0054</td><td>No</td></tr><tr><td class='lessen'>148</td><td><a href='https://ensembl.org/Search/Results?q=CNTN1'>CNTN1</a></td><td>CNTN1</td><td>17931</td><td>-0.031</td><td>-0.0021</td><td>No</td></tr><tr><td class='lessen'>149</td><td><a href='https://ensembl.org/Search/Results?q=ICK'>ICK</a></td><td>ICK</td><td>18209</td><td>-0.032</td><td>-0.0087</td><td>No</td></tr><tr><td class='lessen'>150</td><td><a href='https://ensembl.org/Search/Results?q=PAK7'>PAK7</a></td><td>PAK7</td><td>18244</td><td>-0.033</td><td>-0.0040</td><td>No</td></tr><tr><td class='lessen'>151</td><td><a href='https://ensembl.org/Search/Results?q=MYO10'>MYO10</a></td><td>MYO10</td><td>18482</td><td>-0.034</td><td>-0.0084</td><td>No</td></tr><tr><td class='lessen'>152</td><td><a href='https://ensembl.org/Search/Results?q=MCM10'>MCM10</a></td><td>MCM10</td><td>18493</td><td>-0.035</td><td>-0.0022</td><td>No</td></tr><tr><td class='lessen'>153</td><td><a href='https://ensembl.org/Search/Results?q=DGKI'>DGKI</a></td><td>DGKI</td><td>18589</td><td>-0.035</td><td>0.0002</td><td>No</td></tr><tr><td class='lessen'>154</td><td><a href='https://ensembl.org/Search/Results?q=SPTBN2'>SPTBN2</a></td><td>SPTBN2</td><td>18605</td><td>-0.035</td><td>0.0063</td><td>No</td></tr><tr><td class='lessen'>155</td><td><a href='https://ensembl.org/Search/Results?q=FBXO21'>FBXO21</a></td><td>FBXO21</td><td>18650</td><td>-0.036</td><td>0.0111</td><td>No</td></tr><tr><td class='lessen'>156</td><td><a href='https://ensembl.org/Search/Results?q=WDR68'>WDR68</a></td><td>WDR68</td><td>18813</td><td>-0.037</td><td>0.0107</td><td>No</td></tr><tr><td class='lessen'>157</td><td><a href='https://ensembl.org/Search/Results?q=PAK3'>PAK3</a></td><td>PAK3</td><td>18892</td><td>-0.038</td><td>0.0144</td><td>No</td></tr><tr><td class='lessen'>158</td><td><a href='https://ensembl.org/Search/Results?q=DNM3'>DNM3</a></td><td>DNM3</td><td>19167</td><td>-0.040</td><td>0.0094</td><td>No</td></tr><tr><td class='lessen'>159</td><td><a href='https://ensembl.org/Search/Results?q=E2F3'>E2F3</a></td><td>E2F3</td><td>19227</td><td>-0.041</td><td>0.0146</td><td>No</td></tr><tr><td class='lessen'>160</td><td><a href='https://ensembl.org/Search/Results?q=MPPED2'>MPPED2</a></td><td>MPPED2</td><td>19357</td><td>-0.042</td><td>0.0167</td><td>No</td></tr><tr><td class='lessen'>161</td><td><a href='https://ensembl.org/Search/Results?q=SLC1A1'>SLC1A1</a></td><td>SLC1A1</td><td>19759</td><td>-0.047</td><td>0.0070</td><td>No</td></tr><tr><td class='lessen'>162</td><td><a href='https://ensembl.org/Search/Results?q=OLIG2'>OLIG2</a></td><td>OLIG2</td><td>19896</td><td>-0.049</td><td>0.0100</td><td>No</td></tr><tr><td class='lessen'>163</td><td><a href='https://ensembl.org/Search/Results?q=CDC25A'>CDC25A</a></td><td>CDC25A</td><td>19936</td><td>-0.049</td><td>0.0177</td><td>No</td></tr><tr><td class='lessen'>164</td><td><a href='https://ensembl.org/Search/Results?q=TNRC4'>TNRC4</a></td><td>TNRC4</td><td>20276</td><td>-0.054</td><td>0.0124</td><td>No</td></tr><tr><td class='lessen'>165</td><td><a href='https://ensembl.org/Search/Results?q=LRRTM4'>LRRTM4</a></td><td>LRRTM4</td><td>20562</td><td>-0.060</td><td>0.0106</td><td>No</td></tr><tr><td class='lessen'>166</td><td><a href='https://ensembl.org/Search/Results?q=ZNF804A'>ZNF804A</a></td><td>ZNF804A</td><td>20595</td><td>-0.060</td><td>0.0208</td><td>No</td></tr><tr><td class='lessen'>167</td><td><a href='https://ensembl.org/Search/Results?q=GSK3B'>GSK3B</a></td><td>GSK3B</td><td>20757</td><td>-0.065</td><td>0.0258</td><td>No</td></tr><tr><td class='lessen'>168</td><td><a href='https://ensembl.org/Search/Results?q=FAM110B'>FAM110B</a></td><td>FAM110B</td><td>20872</td><td>-0.068</td><td>0.0337</td><td>No</td></tr><caption class='table'>Table: GSEA details <a href='VERHAAK_PN_2010.tsv'>[plain text format]</a></caption></table></div><br><div class='image'><img name='VERHAAK_PN_2010' src='VERHAAK_PN_2010_105.png'><br><br><caption>Fig 2: VERHAAK_PN_2010    <br> Blue-Pink O' Gram in the Space of the Analyzed GeneSet</caption></div><br><div class='image'><img name='gset_rnd_es_dist' src='gset_rnd_es_dist_106.png'><br><br><caption>Fig 3: VERHAAK_PN_2010: Random ES distribution    <br> Gene set null distribution of ES for <b>VERHAAK_PN_2010</b></caption></div><br></body></html>