<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/1999/REC-html401-19991224/loose.dtd"> <html><head><title>Details for gene set NEFTEL_AC_2019[GSEA]</title><link href='xtools.css' rel='stylesheet'><link href='http://www.gsea-msigdb.org/gsea/images/icon_16x16.png' rel='shortcut icon'></head><body><div class='keyValTable'><table cols='2' border='0'><th class='keyValTable'></th><th class='keyValTable'></th><tr><td>Dataset</td><td>ranaseq_carol_ns_sel_exprs.ranaseq_carol_ns_sel_phenotype.cls<br>#Fosl1_1_versus_Ctrl</td></tr><tr><td>Phenotype</td><td>ranaseq_carol_ns_sel_phenotype.cls#Fosl1_1_versus_Ctrl</td></tr><tr><td>Upregulated in class</td><td>Fosl1_1</td></tr><tr><td>GeneSet</td><td>NEFTEL_AC_2019</td></tr><tr><td>Enrichment Score (ES)</td><td>0.5739193</td></tr><tr><td>Normalized Enrichment Score (NES)</td><td>1.5111359</td></tr><tr><td>Nominal p-value</td><td>0.01927195</td></tr><tr><td>FDR q-value</td><td>0.017123748</td></tr><tr><td>FWER p-Value</td><td>0.136</td></tr><caption class='table'>Table: GSEA Results Summary</caption></table></div><br><div class='image'><img name='enplot_NEFTEL_AC_2019' src='enplot_NEFTEL_AC_2019_312.png'><br><br><caption>Fig 1: Enrichment plot: NEFTEL_AC_2019    <br> Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List</caption></div><br><div class='richTable'><table cols='7' border='1'><th class='richTable'></th><th class='richTable'>SYMBOL</th><th class='richTable'>TITLE</th><th class='richTable'>RANK IN GENE LIST</th><th class='richTable'>RANK METRIC SCORE</th><th class='richTable'>RUNNING ES</th><th class='richTable'>CORE ENRICHMENT</th><tr><td class='lessen'>1</td><td><a href='https://ensembl.org/Search/Results?q=AGT'>AGT</a></td><td>AGT</td><td>850</td><td>1.666</td><td>0.0167</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>2</td><td><a href='https://ensembl.org/Search/Results?q=S100A16'>S100A16</a></td><td>S100A16</td><td>1093</td><td>1.381</td><td>0.0515</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>3</td><td><a href='https://ensembl.org/Search/Results?q=GATM'>GATM</a></td><td>GATM</td><td>1204</td><td>1.287</td><td>0.0891</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>4</td><td><a href='https://ensembl.org/Search/Results?q=HEY1'>HEY1</a></td><td>HEY1</td><td>1266</td><td>1.246</td><td>0.1276</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>5</td><td><a href='https://ensembl.org/Search/Results?q=EDNRB'>EDNRB</a></td><td>EDNRB</td><td>1286</td><td>1.230</td><td>0.1675</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>6</td><td><a href='https://ensembl.org/Search/Results?q=TTYH1'>TTYH1</a></td><td>TTYH1</td><td>1289</td><td>1.228</td><td>0.2080</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>7</td><td><a href='https://ensembl.org/Search/Results?q=BCAN'>BCAN</a></td><td>BCAN</td><td>1442</td><td>1.138</td><td>0.2388</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>8</td><td><a href='https://ensembl.org/Search/Results?q=SPARCL1'>SPARCL1</a></td><td>SPARCL1</td><td>1588</td><td>1.068</td><td>0.2676</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>9</td><td><a href='https://ensembl.org/Search/Results?q=GFAP'>GFAP</a></td><td>GFAP</td><td>1654</td><td>1.033</td><td>0.2989</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>10</td><td><a href='https://ensembl.org/Search/Results?q=PTPRZ1'>PTPRZ1</a></td><td>PTPRZ1</td><td>1701</td><td>1.008</td><td>0.3301</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>11</td><td><a href='https://ensembl.org/Search/Results?q=AQP4'>AQP4</a></td><td>AQP4</td><td>1809</td><td>0.953</td><td>0.3568</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>12</td><td><a href='https://ensembl.org/Search/Results?q=NDRG2'>NDRG2</a></td><td>NDRG2</td><td>1850</td><td>0.932</td><td>0.3858</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>13</td><td><a href='https://ensembl.org/Search/Results?q=RAMP1'>RAMP1</a></td><td>RAMP1</td><td>1876</td><td>0.919</td><td>0.4151</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>14</td><td><a href='https://ensembl.org/Search/Results?q=FABP7'>FABP7</a></td><td>FABP7</td><td>1891</td><td>0.914</td><td>0.4448</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>15</td><td><a href='https://ensembl.org/Search/Results?q=MLC1'>MLC1</a></td><td>MLC1</td><td>1922</td><td>0.899</td><td>0.4732</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>16</td><td><a href='https://ensembl.org/Search/Results?q=S100B'>S100B</a></td><td>S100B</td><td>2014</td><td>0.856</td><td>0.4974</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>17</td><td><a href='https://ensembl.org/Search/Results?q=ATP1B2'>ATP1B2</a></td><td>ATP1B2</td><td>2123</td><td>0.810</td><td>0.5194</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>18</td><td><a href='https://ensembl.org/Search/Results?q=SLC1A3'>SLC1A3</a></td><td>SLC1A3</td><td>2195</td><td>0.783</td><td>0.5421</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>19</td><td><a href='https://ensembl.org/Search/Results?q=ATP1A2'>ATP1A2</a></td><td>ATP1A2</td><td>2413</td><td>0.728</td><td>0.5564</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>20</td><td><a href='https://ensembl.org/Search/Results?q=PCDHGC3'>PCDHGC3</a></td><td>PCDHGC3</td><td>2540</td><td>0.703</td><td>0.5739</td><td bgcolor='#CCFFCC'>Yes</td></tr><tr><td class='lessen'>21</td><td><a href='https://ensembl.org/Search/Results?q=CST3'>CST3</a></td><td>CST3</td><td>4259</td><td>0.580</td><td>0.5155</td><td>No</td></tr><tr><td class='lessen'>22</td><td><a href='https://ensembl.org/Search/Results?q=TSPAN7'>TSPAN7</a></td><td>TSPAN7</td><td>4665</td><td>0.475</td><td>0.5130</td><td>No</td></tr><tr><td class='lessen'>23</td><td><a href='https://ensembl.org/Search/Results?q=MT3'>MT3</a></td><td>MT3</td><td>4714</td><td>0.469</td><td>0.5263</td><td>No</td></tr><tr><td class='lessen'>24</td><td><a href='https://ensembl.org/Search/Results?q=DBI'>DBI</a></td><td>DBI</td><td>6371</td><td>0.245</td><td>0.4596</td><td>No</td></tr><tr><td class='lessen'>25</td><td><a href='https://ensembl.org/Search/Results?q=GPM6B'>GPM6B</a></td><td>GPM6B</td><td>6372</td><td>0.245</td><td>0.4677</td><td>No</td></tr><tr><td class='lessen'>26</td><td><a href='https://ensembl.org/Search/Results?q=CLU'>CLU</a></td><td>CLU</td><td>7980</td><td>0.121</td><td>0.3992</td><td>No</td></tr><tr><td class='lessen'>27</td><td><a href='https://ensembl.org/Search/Results?q=PON2'>PON2</a></td><td>PON2</td><td>8017</td><td>0.118</td><td>0.4014</td><td>No</td></tr><tr><td class='lessen'>28</td><td><a href='https://ensembl.org/Search/Results?q=RAB31'>RAB31</a></td><td>RAB31</td><td>8535</td><td>0.084</td><td>0.3809</td><td>No</td></tr><tr><td class='lessen'>29</td><td><a href='https://ensembl.org/Search/Results?q=F3'>F3</a></td><td>F3</td><td>15573</td><td>-0.188</td><td>0.0693</td><td>No</td></tr><tr><td class='lessen'>30</td><td><a href='https://ensembl.org/Search/Results?q=PRCP'>PRCP</a></td><td>PRCP</td><td>15761</td><td>-0.208</td><td>0.0677</td><td>No</td></tr><tr><td class='lessen'>31</td><td><a href='https://ensembl.org/Search/Results?q=HOPX'>HOPX</a></td><td>HOPX</td><td>15911</td><td>-0.225</td><td>0.0684</td><td>No</td></tr><tr><td class='lessen'>32</td><td><a href='https://ensembl.org/Search/Results?q=SPARC'>SPARC</a></td><td>SPARC</td><td>16714</td><td>-0.331</td><td>0.0431</td><td>No</td></tr><tr><td class='lessen'>33</td><td><a href='https://ensembl.org/Search/Results?q=ANXA5'>ANXA5</a></td><td>ANXA5</td><td>20071</td><td>-0.871</td><td>-0.0796</td><td>No</td></tr><tr><td class='lessen'>34</td><td><a href='https://ensembl.org/Search/Results?q=PMP22'>PMP22</a></td><td>PMP22</td><td>20136</td><td>-0.915</td><td>-0.0522</td><td>No</td></tr><tr><td class='lessen'>35</td><td><a href='https://ensembl.org/Search/Results?q=METTL7B'>METTL7B</a></td><td>METTL7B</td><td>20941</td><td>-1.531</td><td>-0.0379</td><td>No</td></tr><tr><td class='lessen'>36</td><td><a href='https://ensembl.org/Search/Results?q=PLTP'>PLTP</a></td><td>PLTP</td><td>21667</td><td>-2.829</td><td>0.0230</td><td>No</td></tr><caption class='table'>Table: GSEA details <a href='NEFTEL_AC_2019.tsv'>[plain text format]</a></caption></table></div><br><div class='image'><img name='NEFTEL_AC_2019' src='NEFTEL_AC_2019_313.png'><br><br><caption>Fig 2: NEFTEL_AC_2019    <br> Blue-Pink O' Gram in the Space of the Analyzed GeneSet</caption></div><br><div class='image'><img name='gset_rnd_es_dist' src='gset_rnd_es_dist_314.png'><br><br><caption>Fig 3: NEFTEL_AC_2019: Random ES distribution    <br> Gene set null distribution of ES for <b>NEFTEL_AC_2019</b></caption></div><br></body></html>